CDS

Accession Number TCMCG017C05606
gbkey CDS
Protein Id OMP07639.1
Location complement(join(4878..5963,6063..6167,6279..6327,6666..6733,7511..7629,7866..7998,8125..8214,8306..8389))
GeneID InterPro:IPR001680
Organism Corchorus olitorius
locus_tag COLO4_07176

Protein

Length 577aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01013125.1
Definition hypothetical protein COLO4_07176 [Corchorus olitorius]
Locus_tag COLO4_07176

EGGNOG-MAPPER Annotation

COG_category A
Description U3 small nucleolar RNA-associated protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14768        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTGCAAAAGAAGAGCACGGTGACGATGAGATGGACCTAAAAGTAAAGAAGTATCTTCGGGGAGAAGCTGCTAATTTGGAGGGATTAAAAGACAAGAAGCTAAAGGGTCAACTTGCTGTTAGGGAAGAGTTGTATGGAAAATCTGCCAAAGCTGCTGCAAAGATTGAGAAATGGCTTTTGCCAAGTGAGAGTGGATTTTTGGAGGCAGAAGGTATAGAGAAGACATGGAGGATCAAGCAAGACTCCATTGCTAACGAAGTCGGTATCTTAAGCACAAGGAACCAGTATGATATTGTTTTACCAGAACTTGGTCCATACACTCTAGATTTCACCCAAAATGGTCGGTATATGGCAGCTGCTGGACGCAAGGGGCATCTGGCTATTGTTGATATGAAGACATTAAACCTAACAAAGGAGATTCAGGTTAGAGAAACAGTACGTGATGTGGCGTTCTTGCATAATGAGCTTTTTTTTGCAACTGCTCAGAAAAAGTACCCTTACATTTATAATCGAGATGGAACAGAACTTCATTGTTTAAAGCTGGTTCAATTACTATGTGTTTTAGTTTCTTCCTTTTACCCTGCCATTGTTCAGATTATGCATAGGCACAGTAAATGTGCTCCTGATTCTTTGACTGCACTTCCTTCGATAAGTTTACTTGAGATTAGACTAAGGTCAAACTCAGTTAAAGGTTTTACTGTTCAGGAACATGGTGCAGTTCTAAGACTCCAGTTTCTGAAAAACCATTTTCTGTTGGCATCAATCAACAAATCTGGGCAACTTCGTTACCAGGATGTTACAATGGGTGAGATGGTTGGTAATTTTCGGACCGGTTCAGGCCGCACTGATGTTATGCAGGTCAATCCATACAATGGGGTTGTTGCATTAGGTCATTCAAGTGGTACAGTAACAATGTGGAAGCCCACCAGTCCTATTCCACTTGTAAAGATGCTGTGTCATCCTGGGCCTATTTCATCGTTGGCATTCCATCCCAATGGCCAGCTCATGGCTACATCTGGGAGAGAGAAAAAAATAAAGATCTGGGACCTGAGGAAGTTTGAGGTTATCCAAACACTGTCAGGCCATGCAAAGACCTTGAATTTTAGTCAGAAAGGCTTGCTTGCTGCTGGAACTGGCTCATTCGTGCAAATTTTAGCTGATTCTTCTGGCTCCCAGAATTATAGCAGGTATATGTCTCATGCAATGGCTAAAGGTTACCAGATCGGAAAACTTCTGTTTCGACCATATGAAGATGTTCTGGGGATAGGACACTCCATGGGATGGTCTAGTATTCTTGTTCCAGGATCAGGGGAACCCAACTTCGATTCATGGGTGGCAAACCCATTTGAAACATCTAAACAGAGGAGAGAGAAGGAAGTGCACTCTCTGCTTGACAAGCTCCCTCCTGAAACAATTATGTTGGACCCAACAAAGGTTGGTACAGTGAGGCAAGTGAAAAAGAAGGAGAAGCCAACAAAGGAGGAGAGGGAAGCCGAATTGGAAGCTGCTGTTGAAACTGCCAAGGATACCGAGTTTAAAAAGAAAACAAAGGGAAGGAATAAGCCGAGTAAGAGAGCAACGAAGAGGAGGGAACTTATCCATAGAGCCAAGCGGCCTTTCTTGGAGCAAAGAATGGAGGAAAAAGAAATGTCCAGAAAGAAGCAGAAAACTGGCGTGGTAACAGAAATGCCAAAGAGTTTGCAGCGGTTTGTTCGTCAGAAAGCAGGTTAA
Protein:  
MGAKEEHGDDEMDLKVKKYLRGEAANLEGLKDKKLKGQLAVREELYGKSAKAAAKIEKWLLPSESGFLEAEGIEKTWRIKQDSIANEVGILSTRNQYDIVLPELGPYTLDFTQNGRYMAAAGRKGHLAIVDMKTLNLTKEIQVRETVRDVAFLHNELFFATAQKKYPYIYNRDGTELHCLKLVQLLCVLVSSFYPAIVQIMHRHSKCAPDSLTALPSISLLEIRLRSNSVKGFTVQEHGAVLRLQFLKNHFLLASINKSGQLRYQDVTMGEMVGNFRTGSGRTDVMQVNPYNGVVALGHSSGTVTMWKPTSPIPLVKMLCHPGPISSLAFHPNGQLMATSGREKKIKIWDLRKFEVIQTLSGHAKTLNFSQKGLLAAGTGSFVQILADSSGSQNYSRYMSHAMAKGYQIGKLLFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLDPTKVGTVRQVKKKEKPTKEEREAELEAAVETAKDTEFKKKTKGRNKPSKRATKRRELIHRAKRPFLEQRMEEKEMSRKKQKTGVVTEMPKSLQRFVRQKAG